Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.04■□□□□ 0.48
SPENQ96T58 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.04■□□□□ 0.48
SPENQ96T58 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SPENQ96T58 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SPENQ96T58 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.04■□□□□ 0.48
SPENQ96T58 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPENQ96T58 PLK5-205ENST00000642079 1969 ntBASIC18.03■□□□□ 0.48
SPENQ96T58 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.03■□□□□ 0.48
SPENQ96T58 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.03■□□□□ 0.48
SPENQ96T58 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.03■□□□□ 0.48
SPENQ96T58 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SPENQ96T58 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.03■□□□□ 0.48
SPENQ96T58 DGCR10-201ENST00000609839 495 ntBASIC18.03■□□□□ 0.48
SPENQ96T58 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 FAM8A6P-201ENST00000407496 1135 ntBASIC18.03■□□□□ 0.48
SPENQ96T58 PGM5P4-201ENST00000421970 445 ntBASIC18.03■□□□□ 0.48
SPENQ96T58 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.03■□□□□ 0.48
SPENQ96T58 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPENQ96T58 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.02■□□□□ 0.48
SPENQ96T58 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.02■□□□□ 0.48
SPENQ96T58 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SPENQ96T58 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 AC026310.3-201ENST00000625186 2373 ntBASIC18.02■□□□□ 0.48
SPENQ96T58 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPENQ96T58 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SPENQ96T58 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.02■□□□□ 0.47
SPENQ96T58 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.02■□□□□ 0.47
SPENQ96T58 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SPENQ96T58 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.02■□□□□ 0.47
SPENQ96T58 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.02■□□□□ 0.47
SPENQ96T58 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SPENQ96T58 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 AC117947.1-201ENST00000427448 529 ntBASIC18.01■□□□□ 0.47
SPENQ96T58 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.01■□□□□ 0.47
SPENQ96T58 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.01■□□□□ 0.47
SPENQ96T58 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
SPENQ96T58 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.01■□□□□ 0.47
SPENQ96T58 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.01■□□□□ 0.47
SPENQ96T58 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPENQ96T58 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SPENQ96T58 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18■□□□□ 0.47
SPENQ96T58 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18■□□□□ 0.47
SPENQ96T58 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18■□□□□ 0.47
SPENQ96T58 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18■□□□□ 0.47
SPENQ96T58 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18■□□□□ 0.47
SPENQ96T58 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
SPENQ96T58 NAPSB-206ENST00000562112 1266 ntBASIC18■□□□□ 0.47
SPENQ96T58 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
SPENQ96T58 AC139887.4-201ENST00000607877 719 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms