Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 B3GAT3P1-201ENST00000471720 806 ntBASIC19.5■□□□□ 0.71
PCDH15Q96QU1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH15Q96QU1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 AC087388.1-201ENST00000571370 1112 ntBASIC19.49■□□□□ 0.71
PCDH15Q96QU1 AL445675.2-201ENST00000620291 557 ntBASIC19.49■□□□□ 0.71
PCDH15Q96QU1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH15Q96QU1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.49■□□□□ 0.71
PCDH15Q96QU1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.48■□□□□ 0.71
PCDH15Q96QU1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH15Q96QU1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 TSPY14P-201ENST00000303979 915 ntBASIC19.47■□□□□ 0.71
PCDH15Q96QU1 YBX1P10-201ENST00000444752 975 ntBASIC19.47■□□□□ 0.71
PCDH15Q96QU1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 AL121603.2-201ENST00000557373 2117 ntBASIC19.47■□□□□ 0.71
PCDH15Q96QU1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH15Q96QU1 KRT8P20-201ENST00000423953 1409 ntBASIC19.47■□□□□ 0.71
PCDH15Q96QU1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 AK4P3-201ENST00000418260 669 ntBASIC19.46■□□□□ 0.71
PCDH15Q96QU1 LIN28AP1-201ENST00000429574 405 ntBASIC19.46■□□□□ 0.71
PCDH15Q96QU1 AC011506.1-201ENST00000474329 610 ntBASIC19.46■□□□□ 0.71
PCDH15Q96QU1 AC063952.2-201ENST00000498792 1227 ntBASIC19.46■□□□□ 0.71
PCDH15Q96QU1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH15Q96QU1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
PCDH15Q96QU1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.46■□□□□ 0.7
PCDH15Q96QU1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.46■□□□□ 0.7
PCDH15Q96QU1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH15Q96QU1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH15Q96QU1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms