Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21■□□□□ 0.95
CALR3Q96L12 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CALR3Q96L12 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 KRT18P68-201ENST00000392293 1000 ntBASIC21■□□□□ 0.95
CALR3Q96L12 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21■□□□□ 0.95
CALR3Q96L12 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21■□□□□ 0.95
CALR3Q96L12 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21■□□□□ 0.95
CALR3Q96L12 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21■□□□□ 0.95
CALR3Q96L12 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.99■□□□□ 0.95
CALR3Q96L12 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CALR3Q96L12 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CALR3Q96L12 Z82202.1-201ENST00000623446 1880 ntBASIC20.98■□□□□ 0.95
CALR3Q96L12 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.98■□□□□ 0.95
CALR3Q96L12 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.98■□□□□ 0.95
CALR3Q96L12 AC023632.3-201ENST00000521633 145 ntBASIC20.98■□□□□ 0.95
CALR3Q96L12 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.98■□□□□ 0.95
CALR3Q96L12 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.98■□□□□ 0.95
CALR3Q96L12 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.98■□□□□ 0.95
CALR3Q96L12 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.98■□□□□ 0.95
CALR3Q96L12 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.98■□□□□ 0.95
CALR3Q96L12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CALR3Q96L12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CALR3Q96L12 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CALR3Q96L12 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.97■□□□□ 0.95
CALR3Q96L12 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CALR3Q96L12 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CALR3Q96L12 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.97■□□□□ 0.95
CALR3Q96L12 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CALR3Q96L12 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
CALR3Q96L12 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.97■□□□□ 0.95
CALR3Q96L12 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALR3Q96L12 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.97■□□□□ 0.95
CALR3Q96L12 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CALR3Q96L12 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CALR3Q96L12 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALR3Q96L12 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.96■□□□□ 0.95
CALR3Q96L12 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.96■□□□□ 0.95
CALR3Q96L12 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms