Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 KRT8P36-201ENST00000489121 1440 ntBASIC20.31■□□□□ 0.84
SCG3Q8WXD2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 AL162377.1-201ENST00000618844 1793 ntBASIC20.31■□□□□ 0.84
SCG3Q8WXD2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCG3Q8WXD2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCG3Q8WXD2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 AC083880.1-201ENST00000608266 535 ntBASIC20.29■□□□□ 0.84
SCG3Q8WXD2 ITM2C-210ENST00000620962 501 ntBASIC20.29■□□□□ 0.84
SCG3Q8WXD2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG3Q8WXD2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG3Q8WXD2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms