Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 LINC01521-201ENST00000504184 1943 ntBASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FNDC9Q8TBE3 AC092667.1-201ENST00000434301 2586 ntBASIC17.89■□□□□ 0.46
FNDC9Q8TBE3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FNDC9Q8TBE3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FNDC9Q8TBE3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 C1QBPP2-201ENST00000528754 825 ntBASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 RN7SL471P-201ENST00000580476 299 ntBASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 AL031963.3-201ENST00000606441 850 ntBASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 AC066615.1-201ENST00000640911 628 ntBASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 KRT8P20-201ENST00000423953 1409 ntBASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FNDC9Q8TBE3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FNDC9Q8TBE3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 AC124283.5-201ENST00000624661 1809 ntBASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 AL157384.1-201ENST00000445995 2473 ntBASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.86■□□□□ 0.45
FNDC9Q8TBE3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms