Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 AL596275.1-201ENST00000423464 877 ntBASIC21.41■■□□□ 1.02
BEST2Q8NFU1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
BEST2Q8NFU1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.4■■□□□ 1.02
BEST2Q8NFU1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BEST2Q8NFU1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
BEST2Q8NFU1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 AL512408.1-201ENST00000569378 2000 ntBASIC21.39■■□□□ 1.01
BEST2Q8NFU1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST2Q8NFU1 NBPF21P-201ENST00000425093 1451 ntBASIC21.39■■□□□ 1.01
BEST2Q8NFU1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 PHGDH-210ENST00000641115 1638 ntBASIC21.38■■□□□ 1.01
BEST2Q8NFU1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 AC116351.2-201ENST00000606540 1585 ntBASIC21.38■■□□□ 1.01
BEST2Q8NFU1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
BEST2Q8NFU1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.37■■□□□ 1.01
BEST2Q8NFU1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BEST2Q8NFU1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms