Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 AC120498.9-201ENST00000339021 3867 ntBASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 TMEM179-206ENST00000616017 1645 ntBASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 AC093484.2-201ENST00000580996 2166 ntBASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 KRT8P36-201ENST00000489121 1440 ntBASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 BX119927.1-201ENST00000636596 1552 ntBASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 CDV3P1-201ENST00000471403 739 ntBASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNAAF1Q8NEP3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 FAM21FP-204ENST00000608637 956 ntBASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNAAF1Q8NEP3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 TREX1-205ENST00000625293 1783 ntBASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DNAAF1Q8NEP3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 AC097381.1-201ENST00000429019 1296 ntBASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DNAAF1Q8NEP3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms