Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 AC092368.3-202ENST00000574180 1591 ntBASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 AC083880.1-201ENST00000608266 535 ntBASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 TCF3P1-201ENST00000423021 1937 ntBASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.97■□□□□ 0.63
SRFBP1Q8NEF9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 AC098934.4-201ENST00000564127 592 ntBASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 AL391422.3-201ENST00000603791 2761 ntBASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SRFBP1Q8NEF9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 PNMA6B-201ENST00000538162 1200 ntBASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SRFBP1Q8NEF9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SRFBP1Q8NEF9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms