Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 AL031963.3-201ENST00000606441 850 ntBASIC21.68■■□□□ 1.06
RNF169Q8NCN4 AC026471.5-201ENST00000615068 467 ntBASIC21.68■■□□□ 1.06
RNF169Q8NCN4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF169Q8NCN4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 FAM197Y1-201ENST00000421178 764 ntBASIC21.67■■□□□ 1.06
RNF169Q8NCN4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 AC004264.1-201ENST00000608354 794 ntBASIC21.67■■□□□ 1.06
RNF169Q8NCN4 AC133561.5-201ENST00000635547 218 ntBASIC21.67■■□□□ 1.06
RNF169Q8NCN4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF169Q8NCN4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 DPP3P2-201ENST00000416030 1696 ntBASIC21.66■■□□□ 1.06
RNF169Q8NCN4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 AL355355.2-201ENST00000442321 338 ntBASIC21.66■■□□□ 1.06
RNF169Q8NCN4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 CD177P1-201ENST00000606252 935 ntBASIC21.66■■□□□ 1.06
RNF169Q8NCN4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 AC006128.1-201ENST00000624704 1661 ntBASIC21.66■■□□□ 1.06
RNF169Q8NCN4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF169Q8NCN4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 KRT18P21-201ENST00000515767 1272 ntBASIC21.65■■□□□ 1.06
RNF169Q8NCN4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 AP003071.4-201ENST00000562276 1284 ntBASIC21.65■■□□□ 1.06
RNF169Q8NCN4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF169Q8NCN4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 KRT8P17-201ENST00000453110 1448 ntBASIC21.64■■□□□ 1.06
RNF169Q8NCN4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF169Q8NCN4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 AC087499.1-201ENST00000418141 1075 ntBASIC21.64■■□□□ 1.05
RNF169Q8NCN4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF169Q8NCN4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 AL353807.1-201ENST00000427475 662 ntBASIC21.63■■□□□ 1.05
RNF169Q8NCN4 AP002982.1-201ENST00000492365 877 ntBASIC21.63■■□□□ 1.05
RNF169Q8NCN4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF169Q8NCN4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms