Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 AC010536.3-201ENST00000620306 533 ntBASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM116Q8NCL8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM116Q8NCL8 CYP21A1P-202ENST00000354927 1481 ntBASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 AC007322.4-201ENST00000509611 723 ntBASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.71■□□□□ 0.11
TMEM116Q8NCL8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM116Q8NCL8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TMEM116Q8NCL8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TMEM116Q8NCL8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM116Q8NCL8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM116Q8NCL8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM116Q8NCL8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TMEM116Q8NCL8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEM116Q8NCL8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms