Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TTC39CQ8N584 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TTC39CQ8N584 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TMEM179-206ENST00000616017 1645 ntBASIC21.15■□□□□ 0.98
TTC39CQ8N584 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 POU5F1P3-201ENST00000428824 1078 ntBASIC21.15■□□□□ 0.98
TTC39CQ8N584 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.15■□□□□ 0.98
TTC39CQ8N584 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC39CQ8N584 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39CQ8N584 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39CQ8N584 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39CQ8N584 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39CQ8N584 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TTC39CQ8N584 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 AL691432.2-201ENST00000607222 2038 ntBASIC21.14■□□□□ 0.97
TTC39CQ8N584 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TTC39CQ8N584 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC39CQ8N584 AC018553.1-201ENST00000616682 1458 ntBASIC21.13■□□□□ 0.97
TTC39CQ8N584 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 FAM201B-201ENST00000458407 597 ntBASIC21.13■□□□□ 0.97
TTC39CQ8N584 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC39CQ8N584 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC39CQ8N584 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC39CQ8N584 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TTC39CQ8N584 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TTC39CQ8N584 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 TFP1-202ENST00000475455 1573 ntBASIC21.12■□□□□ 0.97
TTC39CQ8N584 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC39CQ8N584 PRKY-204ENST00000533551 1019 ntBASIC21.12■□□□□ 0.97
TTC39CQ8N584 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC39CQ8N584 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms