Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.73■□□□□ 0.91
SCML4Q8N228 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCML4Q8N228 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCML4Q8N228 AL691432.2-201ENST00000607222 2038 ntBASIC20.73■□□□□ 0.91
SCML4Q8N228 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCML4Q8N228 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCML4Q8N228 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.73■□□□□ 0.91
SCML4Q8N228 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCML4Q8N228 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
SCML4Q8N228 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.72■□□□□ 0.91
SCML4Q8N228 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SCML4Q8N228 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.72■□□□□ 0.91
SCML4Q8N228 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.72■□□□□ 0.91
SCML4Q8N228 C1QBPP2-201ENST00000528754 825 ntBASIC20.72■□□□□ 0.91
SCML4Q8N228 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 TCF3P1-201ENST00000423021 1937 ntBASIC20.72■□□□□ 0.91
SCML4Q8N228 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCML4Q8N228 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.72■□□□□ 0.91
SCML4Q8N228 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
SCML4Q8N228 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCML4Q8N228 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 AC239809.2-201ENST00000415381 517 ntBASIC20.71■□□□□ 0.91
SCML4Q8N228 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SCML4Q8N228 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 AC142381.4-202ENST00000563973 229 ntBASIC20.71■□□□□ 0.91
SCML4Q8N228 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 AL023875.1-201ENST00000640777 796 ntBASIC20.71■□□□□ 0.91
SCML4Q8N228 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SCML4Q8N228 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.71■□□□□ 0.91
SCML4Q8N228 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCML4Q8N228 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.7■□□□□ 0.91
SCML4Q8N228 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SCML4Q8N228 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCML4Q8N228 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.7■□□□□ 0.9
SCML4Q8N228 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SCML4Q8N228 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.7■□□□□ 0.9
SCML4Q8N228 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SCML4Q8N228 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.7■□□□□ 0.9
SCML4Q8N228 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 AC110285.5-201ENST00000611501 352 ntBASIC20.7■□□□□ 0.9
SCML4Q8N228 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCML4Q8N228 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SCML4Q8N228 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCML4Q8N228 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.7■□□□□ 0.9
SCML4Q8N228 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.69■□□□□ 0.9
SCML4Q8N228 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.69■□□□□ 0.9
SCML4Q8N228 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.69■□□□□ 0.9
SCML4Q8N228 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.69■□□□□ 0.9
SCML4Q8N228 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCML4Q8N228 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SCML4Q8N228 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
SCML4Q8N228 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.68■□□□□ 0.9
SCML4Q8N228 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCML4Q8N228 KRASP1-201ENST00000407852 552 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms