Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC00528Q8N1L1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.08□□□□□ -0.31
LINC00528Q8N1L1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00528Q8N1L1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
LINC00528Q8N1L1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC121338.2-201ENST00000622535 1744 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AFG3L1P-217ENST00000557444 2447 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 RPS2P4-201ENST00000476944 856 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC026366.1-201ENST00000488803 879 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 ACTR6P1-201ENST00000514311 1104 ntBASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00528Q8N1L1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC061975.6-201ENST00000579045 1553 ntBASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC007225.1-201ENST00000566331 1836 ntBASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC055748.1-201ENST00000489836 959 ntBASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC253576.1-201ENST00000511645 1156 ntBASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 UNC93B5-201ENST00000530315 699 ntBASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LINC00528Q8N1L1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 AC007041.1-201ENST00000438989 1155 ntBASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC00528Q8N1L1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms