Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 YBX1P10-201ENST00000444752 975 ntBASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NPAS4Q8IUM7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 TFP1-202ENST00000475455 1573 ntBASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.4■■□□□ 1.02
NPAS4Q8IUM7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
NPAS4Q8IUM7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPAS4Q8IUM7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPAS4Q8IUM7 AC073508.3-201ENST00000619697 1419 ntBASIC21.39■■□□□ 1.02
NPAS4Q8IUM7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.39■■□□□ 1.02
NPAS4Q8IUM7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 DGCR10-201ENST00000609839 495 ntBASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NPAS4Q8IUM7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 AF106564.1-201ENST00000607058 2553 ntBASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 KRT18P16-201ENST00000510337 1294 ntBASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 AP005242.2-201ENST00000580065 1175 ntBASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPAS4Q8IUM7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 B3GAT3P1-201ENST00000471720 806 ntBASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 C2orf69P3-201ENST00000565542 1120 ntBASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 AC006128.1-201ENST00000624704 1661 ntBASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPAS4Q8IUM7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms