Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1AQ71U36 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1AQ71U36 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1AQ71U36 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBA1AQ71U36 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBA1AQ71U36 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TUBA1AQ71U36 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 KRT16P2-201ENST00000414673 1423 ntBASIC18.27■□□□□ 0.52
TUBA1AQ71U36 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 AC073111.5-205ENST00000641717 521 ntBASIC18.27■□□□□ 0.52
TUBA1AQ71U36 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TUBA1AQ71U36 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TUBA1AQ71U36 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.27■□□□□ 0.51
TUBA1AQ71U36 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBA1AQ71U36 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TUBA1AQ71U36 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBA1AQ71U36 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBA1AQ71U36 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 AC010536.3-201ENST00000620306 533 ntBASIC18.26■□□□□ 0.51
TUBA1AQ71U36 RARRES2P11-201ENST00000635158 484 ntBASIC18.26■□□□□ 0.51
TUBA1AQ71U36 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 AC005082.1-201ENST00000413042 2259 ntBASIC18.26■□□□□ 0.51
TUBA1AQ71U36 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TUBA1AQ71U36 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 NEFHP1-201ENST00000412845 2629 ntBASIC18.25■□□□□ 0.51
TUBA1AQ71U36 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CDCA4P2-201ENST00000441182 718 ntBASIC18.25■□□□□ 0.51
TUBA1AQ71U36 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBA1AQ71U36 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBA1AQ71U36 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms