Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AP003097.1-201ENST00000530657 1135 ntBASIC18.61■□□□□ 0.57
RTL4Q6ZR62 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL4Q6ZR62 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 KRT18P29-201ENST00000397031 1267 ntBASIC18.6■□□□□ 0.57
RTL4Q6ZR62 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 ITM2C-210ENST00000620962 501 ntBASIC18.6■□□□□ 0.57
RTL4Q6ZR62 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
RTL4Q6ZR62 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.59■□□□□ 0.57
RTL4Q6ZR62 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL4Q6ZR62 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.58■□□□□ 0.57
RTL4Q6ZR62 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL4Q6ZR62 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 UNC93B4-201ENST00000505679 747 ntBASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 SOX15-203ENST00000570788 1093 ntBASIC18.57■□□□□ 0.56
RTL4Q6ZR62 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL4Q6ZR62 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms