Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF111Q6ZNA4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 CNN2P6-201ENST00000439038 900 ntBASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 CDCA4P2-201ENST00000441182 718 ntBASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF111Q6ZNA4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 AC011484.1-201ENST00000377652 1995 ntBASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 AC091799.1-201ENST00000422823 811 ntBASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 AC026185.1-201ENST00000445748 174 ntBASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 AC007613.1-201ENST00000572811 2597 ntBASIC19.28■□□□□ 0.68
RNF111Q6ZNA4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 AL591742.1-201ENST00000604433 565 ntBASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF111Q6ZNA4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF111Q6ZNA4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF111Q6ZNA4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 CDV3P1-201ENST00000471403 739 ntBASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF111Q6ZNA4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF111Q6ZNA4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms