Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 AL031963.3-201ENST00000606441 850 ntBASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 MYC-209ENST00000641252 345 ntBASIC17.85■□□□□ 0.45
NHLRC1Q6VVB1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 AC091874.3-201ENST00000512672 1195 ntBASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NHLRC1Q6VVB1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NHLRC1Q6VVB1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 DUSP5P2-201ENST00000426873 1033 ntBASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 AC073210.2-201ENST00000430369 194 ntBASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 AL138781.1-201ENST00000566567 1274 ntBASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 AC142086.2-201ENST00000569753 217 ntBASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
NHLRC1Q6VVB1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 AC104771.1-201ENST00000603335 964 ntBASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.82■□□□□ 0.44
NHLRC1Q6VVB1 KRT8P20-201ENST00000423953 1409 ntBASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NHLRC1Q6VVB1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms