Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39BQ5VTQ0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TTC39BQ5VTQ0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39BQ5VTQ0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39BQ5VTQ0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 ITM2C-210ENST00000620962 501 ntBASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39BQ5VTQ0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.91
TTC39BQ5VTQ0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TTC39BQ5VTQ0 AC092720.2-201ENST00000602388 1665 ntBASIC20.7■□□□□ 0.91
TTC39BQ5VTQ0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39BQ5VTQ0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 HLA-G-202ENST00000376815 851 ntBASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 HLA-G-203ENST00000376818 1127 ntBASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 AC008403.3-201ENST00000598924 454 ntBASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 AC007952.6-201ENST00000573168 2673 ntBASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 AC003957.1-201ENST00000625108 2673 ntBASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39BQ5VTQ0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 AC008687.6-201ENST00000596318 630 ntBASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39BQ5VTQ0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms