Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
LINC01554Q52M75 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC01554Q52M75 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 MTX2-204ENST00000443241 799 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC01554Q52M75 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC01554Q52M75 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
LINC01554Q52M75 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LINC01554Q52M75 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC01554Q52M75 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms