Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.7■□□□□ 0.91
EFEMP1Q12805 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.7■□□□□ 0.9
EFEMP1Q12805 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.7■□□□□ 0.9
EFEMP1Q12805 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.7■□□□□ 0.9
EFEMP1Q12805 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.7■□□□□ 0.9
EFEMP1Q12805 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.7■□□□□ 0.9
EFEMP1Q12805 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFEMP1Q12805 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 AL157384.1-201ENST00000445995 2473 ntBASIC20.69■□□□□ 0.9
EFEMP1Q12805 GABARAPL3-202ENST00000624044 1851 ntBASIC20.69■□□□□ 0.9
EFEMP1Q12805 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 AC133681.1-201ENST00000465482 601 ntBASIC20.69■□□□□ 0.9
EFEMP1Q12805 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFEMP1Q12805 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
EFEMP1Q12805 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 AC110285.5-201ENST00000611501 352 ntBASIC20.68■□□□□ 0.9
EFEMP1Q12805 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
EFEMP1Q12805 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFEMP1Q12805 BX119927.1-201ENST00000636596 1552 ntBASIC20.68■□□□□ 0.9
EFEMP1Q12805 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFEMP1Q12805 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFEMP1Q12805 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFEMP1Q12805 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFEMP1Q12805 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EFEMP1Q12805 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFEMP1Q12805 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 LINC01006-201ENST00000333319 2292 ntBASIC20.66■□□□□ 0.9
EFEMP1Q12805 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 AL391422.3-201ENST00000603791 2761 ntBASIC20.66■□□□□ 0.9
EFEMP1Q12805 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 AC008550.1-201ENST00000511500 884 ntBASIC20.66■□□□□ 0.9
EFEMP1Q12805 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.66■□□□□ 0.9
EFEMP1Q12805 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFEMP1Q12805 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms