Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.05■□□□□ 0.8
AP1S1P61966 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.05■□□□□ 0.8
AP1S1P61966 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.05■□□□□ 0.8
AP1S1P61966 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.05■□□□□ 0.8
AP1S1P61966 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
AP1S1P61966 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.05■□□□□ 0.8
AP1S1P61966 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP1S1P61966 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
AP1S1P61966 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.05■□□□□ 0.8
AP1S1P61966 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S1P61966 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
AP1S1P61966 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S1P61966 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.04■□□□□ 0.8
AP1S1P61966 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S1P61966 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.04■□□□□ 0.8
AP1S1P61966 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.04■□□□□ 0.8
AP1S1P61966 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
AP1S1P61966 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.04■□□□□ 0.8
AP1S1P61966 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S1P61966 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S1P61966 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
AP1S1P61966 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.03■□□□□ 0.8
AP1S1P61966 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP1S1P61966 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
AP1S1P61966 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.03■□□□□ 0.8
AP1S1P61966 PRKY-204ENST00000533551 1019 ntBASIC20.03■□□□□ 0.8
AP1S1P61966 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.03■□□□□ 0.8
AP1S1P61966 RN7SL471P-201ENST00000580476 299 ntBASIC20.03■□□□□ 0.8
AP1S1P61966 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S1P61966 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 AL391422.3-201ENST00000603791 2761 ntBASIC20.02■□□□□ 0.8
AP1S1P61966 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
AP1S1P61966 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.02■□□□□ 0.8
AP1S1P61966 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 PRORSD1P-201ENST00000295112 541 ntBASIC20.02■□□□□ 0.8
AP1S1P61966 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.02■□□□□ 0.8
AP1S1P61966 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.02■□□□□ 0.8
AP1S1P61966 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.02■□□□□ 0.8
AP1S1P61966 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.02■□□□□ 0.8
AP1S1P61966 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.02■□□□□ 0.8
AP1S1P61966 TMEM191A-211ENST00000637163 1067 ntBASIC20.02■□□□□ 0.8
AP1S1P61966 AC018553.1-201ENST00000616682 1458 ntBASIC20.02■□□□□ 0.8
AP1S1P61966 AP001271.2-201ENST00000624018 1556 ntBASIC20.02■□□□□ 0.8
AP1S1P61966 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.02■□□□□ 0.8
AP1S1P61966 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S1P61966 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
AP1S1P61966 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.02■□□□□ 0.79
AP1S1P61966 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.02■□□□□ 0.79
AP1S1P61966 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP1S1P61966 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.02■□□□□ 0.79
AP1S1P61966 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AP1S1P61966 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AP1S1P61966 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S1P61966 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms