Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 AP001330.3-201ENST00000520123 633 ntBASIC18.16■□□□□ 0.5
CDC42P60953 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.16■□□□□ 0.5
CDC42P60953 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC42P60953 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDC42P60953 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.16■□□□□ 0.5
CDC42P60953 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC42P60953 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDC42P60953 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 EDA-201ENST00000338901 1233 ntBASIC18.15■□□□□ 0.5
CDC42P60953 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CDC42P60953 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.15■□□□□ 0.5
CDC42P60953 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 AC008406.3-201ENST00000620001 1374 ntBASIC18.15■□□□□ 0.5
CDC42P60953 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDC42P60953 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDC42P60953 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.15■□□□□ 0.5
CDC42P60953 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDC42P60953 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDC42P60953 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDC42P60953 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.14■□□□□ 0.49
CDC42P60953 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDC42P60953 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CDC42P60953 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L2-201ENST00000561772 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L6-201ENST00000626483 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L1-201ENST00000627662 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L8-201ENST00000629013 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L3-201ENST00000630187 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L7-201ENST00000630678 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 DUX4L5-201ENST00000630834 1275 ntBASIC18.14■□□□□ 0.49
CDC42P60953 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CDC42P60953 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CDC42P60953 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDC42P60953 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDC42P60953 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.14■□□□□ 0.49
CDC42P60953 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.14■□□□□ 0.49
CDC42P60953 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 AC009237.14-201ENST00000609975 1594 ntBASIC18.13■□□□□ 0.49
CDC42P60953 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDC42P60953 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.13■□□□□ 0.49
CDC42P60953 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 PBX2P1-201ENST00000493219 1291 ntBASIC18.13■□□□□ 0.49
CDC42P60953 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.13■□□□□ 0.49
CDC42P60953 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDC42P60953 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
CDC42P60953 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDC42P60953 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDC42P60953 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42P60953 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42P60953 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42P60953 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDC42P60953 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42P60953 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDC42P60953 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms