Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
APOC4P55056 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.6□□□□□ -0.07
APOC4P55056 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 AC005229.4-201ENST00000610085 2198 ntBASIC14.6□□□□□ -0.07
APOC4P55056 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.6□□□□□ -0.07
APOC4P55056 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
APOC4P55056 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
APOC4P55056 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
APOC4P55056 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOC4P55056 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.6□□□□□ -0.07
APOC4P55056 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOC4P55056 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.59□□□□□ -0.07
APOC4P55056 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC4P55056 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC4P55056 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC4P55056 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
APOC4P55056 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.59□□□□□ -0.07
APOC4P55056 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.59□□□□□ -0.07
APOC4P55056 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
APOC4P55056 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
APOC4P55056 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.59□□□□□ -0.07
APOC4P55056 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOC4P55056 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOC4P55056 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOC4P55056 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.58□□□□□ -0.07
APOC4P55056 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOC4P55056 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOC4P55056 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.58□□□□□ -0.07
APOC4P55056 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOC4P55056 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOC4P55056 NBPF21P-201ENST00000425093 1451 ntBASIC14.58□□□□□ -0.08
APOC4P55056 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC4P55056 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APOC4P55056 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC4P55056 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
APOC4P55056 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOC4P55056 AC012618.2-201ENST00000428058 849 ntBASIC14.58□□□□□ -0.08
APOC4P55056 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.58□□□□□ -0.08
APOC4P55056 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.58□□□□□ -0.08
APOC4P55056 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
APOC4P55056 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC4P55056 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC4P55056 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.58□□□□□ -0.08
APOC4P55056 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.58□□□□□ -0.08
APOC4P55056 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOC4P55056 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
APOC4P55056 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOC4P55056 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.57□□□□□ -0.08
APOC4P55056 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms