Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PMS2P54278 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PMS2P54278 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PMS2P54278 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 AC093503.3-201ENST00000624917 2352 ntBASIC20.49■□□□□ 0.87
PMS2P54278 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PMS2P54278 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
PMS2P54278 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.49■□□□□ 0.87
PMS2P54278 AC006015.1-201ENST00000429970 570 ntBASIC20.49■□□□□ 0.87
PMS2P54278 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS2P54278 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.49■□□□□ 0.87
PMS2P54278 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.49■□□□□ 0.87
PMS2P54278 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS2P54278 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PMS2P54278 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS2P54278 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS2P54278 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS2P54278 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS2P54278 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS2P54278 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 HLA-L-209ENST00000420110 1011 ntBASIC20.48■□□□□ 0.87
PMS2P54278 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.48■□□□□ 0.87
PMS2P54278 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS2P54278 AC080038.1-201ENST00000611274 1154 ntBASIC20.48■□□□□ 0.87
PMS2P54278 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS2P54278 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.48■□□□□ 0.87
PMS2P54278 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS2P54278 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PMS2P54278 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS2P54278 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS2P54278 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PMS2P54278 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.47■□□□□ 0.87
PMS2P54278 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
PMS2P54278 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS2P54278 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 AC016769.1-201ENST00000409132 1010 ntBASIC20.47■□□□□ 0.87
PMS2P54278 AC010141.2-201ENST00000452426 721 ntBASIC20.47■□□□□ 0.87
PMS2P54278 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.47■□□□□ 0.87
PMS2P54278 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS2P54278 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PMS2P54278 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PMS2P54278 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS2P54278 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PMS2P54278 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.46■□□□□ 0.87
PMS2P54278 AC137761.2-201ENST00000561729 223 ntBASIC20.46■□□□□ 0.87
PMS2P54278 AC145350.3-201ENST00000569033 163 ntBASIC20.46■□□□□ 0.87
PMS2P54278 KRT18P61-201ENST00000585825 1298 ntBASIC20.46■□□□□ 0.87
PMS2P54278 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.46■□□□□ 0.87
PMS2P54278 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PMS2P54278 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms