Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.91■■□□□ 1.1
CLCN3P51790 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN3P51790 AC004264.1-201ENST00000608354 794 ntBASIC21.91■■□□□ 1.1
CLCN3P51790 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN3P51790 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLCN3P51790 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLCN3P51790 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN3P51790 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLCN3P51790 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.9■■□□□ 1.1
CLCN3P51790 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN3P51790 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.9■■□□□ 1.1
CLCN3P51790 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.9■■□□□ 1.1
CLCN3P51790 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN3P51790 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN3P51790 AC116351.2-201ENST00000606540 1585 ntBASIC21.9■■□□□ 1.1
CLCN3P51790 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN3P51790 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN3P51790 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CLCN3P51790 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN3P51790 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN3P51790 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CLCN3P51790 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CLCN3P51790 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN3P51790 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLCN3P51790 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.89■■□□□ 1.1
CLCN3P51790 KRT17P2-201ENST00000300992 1314 ntBASIC21.89■■□□□ 1.1
CLCN3P51790 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN3P51790 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.89■■□□□ 1.09
CLCN3P51790 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN3P51790 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.89■■□□□ 1.09
CLCN3P51790 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.89■■□□□ 1.09
CLCN3P51790 MIR4785-201ENST00000585005 73 ntBASIC21.89■■□□□ 1.09
CLCN3P51790 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.89■■□□□ 1.09
CLCN3P51790 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.89■■□□□ 1.09
CLCN3P51790 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN3P51790 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCN3P51790 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCN3P51790 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN3P51790 AC073314.1-201ENST00000568729 2216 ntBASIC21.88■■□□□ 1.09
CLCN3P51790 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CLCN3P51790 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CLCN3P51790 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.88■■□□□ 1.09
CLCN3P51790 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CLCN3P51790 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN3P51790 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CLCN3P51790 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 AC018553.1-201ENST00000616682 1458 ntBASIC21.88■■□□□ 1.09
CLCN3P51790 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.88■■□□□ 1.09
CLCN3P51790 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN3P51790 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.88■■□□□ 1.09
CLCN3P51790 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN3P51790 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN3P51790 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN3P51790 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN3P51790 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLCN3P51790 AC020907.5-201ENST00000624372 1936 ntBASIC21.87■■□□□ 1.09
CLCN3P51790 FAM197Y1-201ENST00000421178 764 ntBASIC21.87■■□□□ 1.09
CLCN3P51790 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCN3P51790 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.87■■□□□ 1.09
CLCN3P51790 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCN3P51790 AC073912.3-201ENST00000624414 853 ntBASIC21.87■■□□□ 1.09
CLCN3P51790 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.87■■□□□ 1.09
CLCN3P51790 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN3P51790 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN3P51790 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLCN3P51790 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN3P51790 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN3P51790 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CLCN3P51790 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 AL355075.4-201ENST00000554988 638 ntBASIC21.86■■□□□ 1.09
CLCN3P51790 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 CD177P1-201ENST00000606252 935 ntBASIC21.86■■□□□ 1.09
CLCN3P51790 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CLCN3P51790 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 TFP1-202ENST00000475455 1573 ntBASIC21.86■■□□□ 1.09
CLCN3P51790 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN3P51790 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN3P51790 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CLCN3P51790 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN3P51790 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.85■■□□□ 1.09
CLCN3P51790 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLCN3P51790 AP006587.1-201ENST00000534129 1502 ntBASIC21.85■■□□□ 1.09
CLCN3P51790 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms