Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 AL162412.1-201ENST00000567129 965 ntBASIC17.49■□□□□ 0.39
CCR9P51686 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.49■□□□□ 0.39
CCR9P51686 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCR9P51686 UBE2DNL-204ENST00000602536 740 ntBASIC17.49■□□□□ 0.39
CCR9P51686 MYCNOS-205ENST00000641950 531 ntBASIC17.49■□□□□ 0.39
CCR9P51686 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCR9P51686 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.49■□□□□ 0.39
CCR9P51686 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCR9P51686 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCR9P51686 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.48■□□□□ 0.39
CCR9P51686 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.48■□□□□ 0.39
CCR9P51686 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.48■□□□□ 0.39
CCR9P51686 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.48■□□□□ 0.39
CCR9P51686 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CCR9P51686 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.48■□□□□ 0.39
CCR9P51686 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCR9P51686 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CCR9P51686 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.48■□□□□ 0.39
CCR9P51686 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCR9P51686 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCR9P51686 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCR9P51686 AC093484.2-201ENST00000580996 2166 ntBASIC17.47■□□□□ 0.39
CCR9P51686 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
CCR9P51686 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCR9P51686 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.47■□□□□ 0.39
CCR9P51686 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.47■□□□□ 0.39
CCR9P51686 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.47■□□□□ 0.39
CCR9P51686 TERF1P5-201ENST00000477545 1207 ntBASIC17.47■□□□□ 0.39
CCR9P51686 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.47■□□□□ 0.39
CCR9P51686 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.47■□□□□ 0.39
CCR9P51686 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.47■□□□□ 0.39
CCR9P51686 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCR9P51686 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCR9P51686 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCR9P51686 MIR638-201ENST00000385237 100 ntBASIC17.46■□□□□ 0.39
CCR9P51686 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.46■□□□□ 0.39
CCR9P51686 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.46■□□□□ 0.39
CCR9P51686 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.46■□□□□ 0.39
CCR9P51686 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.46■□□□□ 0.39
CCR9P51686 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCR9P51686 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCR9P51686 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCR9P51686 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCR9P51686 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CCR9P51686 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.45■□□□□ 0.38
CCR9P51686 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms