Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 AC097658.1-201ENST00000475555 843 ntBASIC19.23■□□□□ 0.67
SLC6A12P48065 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
SLC6A12P48065 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 AC142086.2-201ENST00000569753 217 ntBASIC19.23■□□□□ 0.67
SLC6A12P48065 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SLC6A12P48065 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 TREX1-205ENST00000625293 1783 ntBASIC19.23■□□□□ 0.67
SLC6A12P48065 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC6A12P48065 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC6A12P48065 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC6A12P48065 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC6A12P48065 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 AC083880.1-201ENST00000608266 535 ntBASIC19.22■□□□□ 0.67
SLC6A12P48065 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 AL158211.5-201ENST00000623583 2518 ntBASIC19.22■□□□□ 0.67
SLC6A12P48065 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC6A12P48065 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC6A12P48065 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A12P48065 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC6A12P48065 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A12P48065 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC6A12P48065 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A12P48065 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC6A12P48065 HLA-B-256ENST00000639848 1089 ntBASIC19.21■□□□□ 0.67
SLC6A12P48065 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC6A12P48065 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC6A12P48065 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SLC6A12P48065 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A12P48065 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
SLC6A12P48065 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A12P48065 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC6A12P48065 AL390719.1-204ENST00000412397 1219 ntBASIC19.2■□□□□ 0.66
SLC6A12P48065 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 AC069152.1-201ENST00000438030 544 ntBASIC19.2■□□□□ 0.66
SLC6A12P48065 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC6A12P48065 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A12P48065 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC6A12P48065 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC6A12P48065 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC6A12P48065 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 AC116351.2-201ENST00000606540 1585 ntBASIC19.19■□□□□ 0.66
SLC6A12P48065 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC6A12P48065 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC6A12P48065 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 AC133041.1-202ENST00000642053 222 ntBASIC19.19■□□□□ 0.66
SLC6A12P48065 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC6A12P48065 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC6A12P48065 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC6A12P48065 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms