Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RORAP35398 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.9■□□□□ 0.62
RORAP35398 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.9■□□□□ 0.62
RORAP35398 AL121906.2-201ENST00000621597 723 ntBASIC18.9■□□□□ 0.62
RORAP35398 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RORAP35398 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.9■□□□□ 0.62
RORAP35398 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.9■□□□□ 0.62
RORAP35398 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 KRT8P20-201ENST00000423953 1409 ntBASIC18.9■□□□□ 0.62
RORAP35398 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RORAP35398 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
RORAP35398 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RORAP35398 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.89■□□□□ 0.61
RORAP35398 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RORAP35398 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.89■□□□□ 0.61
RORAP35398 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RORAP35398 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.89■□□□□ 0.61
RORAP35398 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RORAP35398 AL049637.2-201ENST00000641778 930 ntBASIC18.89■□□□□ 0.61
RORAP35398 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.89■□□□□ 0.61
RORAP35398 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.89■□□□□ 0.61
RORAP35398 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RORAP35398 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RORAP35398 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RORAP35398 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.89■□□□□ 0.61
RORAP35398 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.89■□□□□ 0.61
RORAP35398 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.88■□□□□ 0.61
RORAP35398 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RORAP35398 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.88■□□□□ 0.61
RORAP35398 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RORAP35398 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RORAP35398 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.88■□□□□ 0.61
RORAP35398 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.88■□□□□ 0.61
RORAP35398 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.88■□□□□ 0.61
RORAP35398 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.88■□□□□ 0.61
RORAP35398 AP001412.1-201ENST00000608405 714 ntBASIC18.88■□□□□ 0.61
RORAP35398 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RORAP35398 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RORAP35398 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.88■□□□□ 0.61
RORAP35398 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
RORAP35398 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RORAP35398 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.87■□□□□ 0.61
RORAP35398 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RORAP35398 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.87■□□□□ 0.61
RORAP35398 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.87■□□□□ 0.61
RORAP35398 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.87■□□□□ 0.61
RORAP35398 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RORAP35398 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RORAP35398 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RORAP35398 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 NBPF21P-201ENST00000425093 1451 ntBASIC18.86■□□□□ 0.61
RORAP35398 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.86■□□□□ 0.61
RORAP35398 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RORAP35398 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.86■□□□□ 0.61
RORAP35398 TSPY7P-201ENST00000431358 1114 ntBASIC18.86■□□□□ 0.61
RORAP35398 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
RORAP35398 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.86■□□□□ 0.61
RORAP35398 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RORAP35398 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.86■□□□□ 0.61
RORAP35398 AC113410.3-201ENST00000623366 203 ntBASIC18.86■□□□□ 0.61
RORAP35398 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RORAP35398 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms