Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RFC4P35249 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
RFC4P35249 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.1■■□□□ 1.61
RFC4P35249 Z98882.1-201ENST00000622160 2253 ntBASIC25.1■■□□□ 1.61
RFC4P35249 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.1■■□□□ 1.61
RFC4P35249 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.1■■□□□ 1.61
RFC4P35249 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.1■■□□□ 1.61
RFC4P35249 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.1■■□□□ 1.61
RFC4P35249 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFC4P35249 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.09■■□□□ 1.61
RFC4P35249 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
RFC4P35249 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 ISCU-203ENST00000431221 799 ntTSL 2 BASIC25.09■■□□□ 1.61
RFC4P35249 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.09■■□□□ 1.61
RFC4P35249 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.09■■□□□ 1.61
RFC4P35249 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.09■■□□□ 1.61
RFC4P35249 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC4P35249 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RFC4P35249 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
RFC4P35249 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFC4P35249 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.08■■□□□ 1.61
RFC4P35249 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.08■■□□□ 1.61
RFC4P35249 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
RFC4P35249 HMGA1P5-201ENST00000412453 271 ntBASIC25.08■■□□□ 1.61
RFC4P35249 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RFC4P35249 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.08■■□□□ 1.61
RFC4P35249 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC25.08■■□□□ 1.61
RFC4P35249 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.08■■□□□ 1.61
RFC4P35249 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFC4P35249 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFC4P35249 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFC4P35249 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFC4P35249 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
RFC4P35249 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.6
RFC4P35249 AL049796.1-201ENST00000565336 1766 ntBASIC25.08■■□□□ 1.6
RFC4P35249 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFC4P35249 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
RFC4P35249 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.07■■□□□ 1.6
RFC4P35249 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.07■■□□□ 1.6
RFC4P35249 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.07■■□□□ 1.6
RFC4P35249 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.07■■□□□ 1.6
RFC4P35249 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC4P35249 YBX1P10-201ENST00000444752 975 ntBASIC25.07■■□□□ 1.6
RFC4P35249 AC091390.4-202ENST00000476426 537 ntBASIC25.07■■□□□ 1.6
RFC4P35249 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.07■■□□□ 1.6
RFC4P35249 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.07■■□□□ 1.6
RFC4P35249 AC130371.2-201ENST00000619443 611 ntBASIC25.07■■□□□ 1.6
RFC4P35249 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.07■■□□□ 1.6
RFC4P35249 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC4P35249 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC4P35249 AL121603.2-201ENST00000557373 2117 ntBASIC25.07■■□□□ 1.6
RFC4P35249 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC4P35249 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
RFC4P35249 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.06■■□□□ 1.6
RFC4P35249 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
RFC4P35249 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC4P35249 TUBB8P6-201ENST00000436895 1288 ntBASIC25.06■■□□□ 1.6
RFC4P35249 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.06■■□□□ 1.6
RFC4P35249 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFC4P35249 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.06■■□□□ 1.6
RFC4P35249 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC25.06■■□□□ 1.6
RFC4P35249 AC139887.4-201ENST00000607877 719 ntBASIC25.06■■□□□ 1.6
RFC4P35249 AP000692.2-201ENST00000608391 879 ntBASIC25.06■■□□□ 1.6
RFC4P35249 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RFC4P35249 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC4P35249 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC4P35249 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.06■■□□□ 1.6
RFC4P35249 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 AC116351.2-201ENST00000606540 1585 ntBASIC25.05■■□□□ 1.6
RFC4P35249 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RFC4P35249 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.05■■□□□ 1.6
RFC4P35249 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.05■■□□□ 1.6
RFC4P35249 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 HIST1H2APS4-201ENST00000362070 348 ntBASIC25.05■■□□□ 1.6
RFC4P35249 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC4P35249 RNF152P1-201ENST00000397754 604 ntBASIC25.05■■□□□ 1.6
RFC4P35249 AL031133.1-201ENST00000406807 723 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms