Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN7P35236 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN7P35236 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PTPN7P35236 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN7P35236 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN7P35236 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PTPN7P35236 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PTPN7P35236 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN7P35236 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN7P35236 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN7P35236 PHGDH-210ENST00000641115 1638 ntBASIC20.57■□□□□ 0.88
PTPN7P35236 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.57■□□□□ 0.88
PTPN7P35236 BX323043.1-201ENST00000641006 1765 ntBASIC20.57■□□□□ 0.88
PTPN7P35236 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
PTPN7P35236 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.57■□□□□ 0.88
PTPN7P35236 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PTPN7P35236 AC005332.7-201ENST00000614046 2005 ntBASIC20.57■□□□□ 0.88
PTPN7P35236 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PTPN7P35236 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PTPN7P35236 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PTPN7P35236 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN7P35236 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN7P35236 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.56■□□□□ 0.88
PTPN7P35236 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.56■□□□□ 0.88
PTPN7P35236 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.56■□□□□ 0.88
PTPN7P35236 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.56■□□□□ 0.88
PTPN7P35236 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.56■□□□□ 0.88
PTPN7P35236 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTPN7P35236 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTPN7P35236 AC093484.2-201ENST00000580996 2166 ntBASIC20.55■□□□□ 0.88
PTPN7P35236 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTPN7P35236 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
PTPN7P35236 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 AC004911.1-201ENST00000416316 871 ntBASIC20.55■□□□□ 0.88
PTPN7P35236 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
PTPN7P35236 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTPN7P35236 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PTPN7P35236 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.54■□□□□ 0.88
PTPN7P35236 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.54■□□□□ 0.88
PTPN7P35236 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 AC092437.1-201ENST00000624794 1048 ntBASIC20.54■□□□□ 0.88
PTPN7P35236 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTPN7P35236 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.54■□□□□ 0.88
PTPN7P35236 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PTPN7P35236 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms