Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
XPAP23025 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
XPAP23025 GCSHP5-201ENST00000443090 522 ntBASIC20.06■□□□□ 0.8
XPAP23025 AC098590.1-201ENST00000468126 897 ntBASIC20.06■□□□□ 0.8
XPAP23025 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.06■□□□□ 0.8
XPAP23025 SMG8-203ENST00000578922 2178 ntBASIC20.06■□□□□ 0.8
XPAP23025 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
XPAP23025 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
XPAP23025 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XPAP23025 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.05■□□□□ 0.8
XPAP23025 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.05■□□□□ 0.8
XPAP23025 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.05■□□□□ 0.8
XPAP23025 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.05■□□□□ 0.8
XPAP23025 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XPAP23025 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.04■□□□□ 0.8
XPAP23025 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
XPAP23025 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XPAP23025 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.04■□□□□ 0.8
XPAP23025 AC239809.2-201ENST00000415381 517 ntBASIC20.04■□□□□ 0.8
XPAP23025 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.04■□□□□ 0.8
XPAP23025 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.04■□□□□ 0.8
XPAP23025 RPPH1-201ENST00000516869 333 ntBASIC20.04■□□□□ 0.8
XPAP23025 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.04■□□□□ 0.8
XPAP23025 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.04■□□□□ 0.8
XPAP23025 AL121906.2-201ENST00000621597 723 ntBASIC20.04■□□□□ 0.8
XPAP23025 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XPAP23025 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XPAP23025 AC020907.5-201ENST00000624372 1936 ntBASIC20.04■□□□□ 0.8
XPAP23025 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
XPAP23025 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
XPAP23025 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.03■□□□□ 0.8
XPAP23025 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.03■□□□□ 0.8
XPAP23025 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.03■□□□□ 0.8
XPAP23025 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.03■□□□□ 0.8
XPAP23025 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.03■□□□□ 0.8
XPAP23025 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.03■□□□□ 0.8
XPAP23025 MTDHP1-201ENST00000605323 784 ntBASIC20.03■□□□□ 0.8
XPAP23025 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.03■□□□□ 0.8
XPAP23025 AL359736.2-201ENST00000621992 437 ntBASIC20.03■□□□□ 0.8
XPAP23025 AL023875.1-201ENST00000640777 796 ntBASIC20.03■□□□□ 0.8
XPAP23025 AP006294.2-201ENST00000641667 209 ntBASIC20.03■□□□□ 0.8
XPAP23025 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XPAP23025 AC124283.5-201ENST00000624661 1809 ntBASIC20.03■□□□□ 0.8
XPAP23025 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XPAP23025 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XPAP23025 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
XPAP23025 HCG11-201ENST00000411553 5696 ntBASIC20.02■□□□□ 0.8
XPAP23025 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.02■□□□□ 0.8
XPAP23025 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.02■□□□□ 0.8
XPAP23025 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.02■□□□□ 0.8
XPAP23025 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.02■□□□□ 0.8
XPAP23025 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.02■□□□□ 0.8
XPAP23025 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
XPAP23025 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
XPAP23025 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
XPAP23025 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
XPAP23025 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
XPAP23025 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
XPAP23025 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms