Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.88■□□□□ 0.93
RARAP10276 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.88■□□□□ 0.93
RARAP10276 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.88■□□□□ 0.93
RARAP10276 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RARAP10276 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RARAP10276 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RARAP10276 MKRN4P-201ENST00000444706 1521 ntBASIC20.88■□□□□ 0.93
RARAP10276 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
RARAP10276 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.87■□□□□ 0.93
RARAP10276 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RARAP10276 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RARAP10276 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.87■□□□□ 0.93
RARAP10276 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.87■□□□□ 0.93
RARAP10276 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.87■□□□□ 0.93
RARAP10276 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RARAP10276 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.87■□□□□ 0.93
RARAP10276 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.87■□□□□ 0.93
RARAP10276 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RARAP10276 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.86■□□□□ 0.93
RARAP10276 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.86■□□□□ 0.93
RARAP10276 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.86■□□□□ 0.93
RARAP10276 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.86■□□□□ 0.93
RARAP10276 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.86■□□□□ 0.93
RARAP10276 C2orf69P4-201ENST00000565394 541 ntBASIC20.86■□□□□ 0.93
RARAP10276 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RARAP10276 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RARAP10276 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RARAP10276 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RARAP10276 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RARAP10276 LSM12P1-201ENST00000411836 588 ntBASIC20.85■□□□□ 0.93
RARAP10276 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.85■□□□□ 0.93
RARAP10276 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.85■□□□□ 0.93
RARAP10276 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.85■□□□□ 0.93
RARAP10276 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RARAP10276 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
RARAP10276 KRT8P17-201ENST00000453110 1448 ntBASIC20.85■□□□□ 0.93
RARAP10276 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RARAP10276 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RARAP10276 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RARAP10276 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.84■□□□□ 0.93
RARAP10276 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RARAP10276 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 AC092666.2-201ENST00000613287 246 ntBASIC20.84■□□□□ 0.93
RARAP10276 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.84■□□□□ 0.93
RARAP10276 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RARAP10276 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.84■□□□□ 0.93
RARAP10276 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RARAP10276 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.83■□□□□ 0.93
RARAP10276 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.83■□□□□ 0.93
RARAP10276 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RARAP10276 TREX1-205ENST00000625293 1783 ntBASIC20.83■□□□□ 0.93
RARAP10276 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RARAP10276 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.83■□□□□ 0.93
RARAP10276 BX276092.2-201ENST00000417668 665 ntBASIC20.83■□□□□ 0.93
RARAP10276 AC006970.2-201ENST00000450065 779 ntBASIC20.83■□□□□ 0.93
RARAP10276 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.83■□□□□ 0.93
RARAP10276 AC083906.2-201ENST00000511578 360 ntBASIC20.83■□□□□ 0.93
RARAP10276 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.83■□□□□ 0.93
RARAP10276 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.83■□□□□ 0.93
RARAP10276 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RARAP10276 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RARAP10276 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RARAP10276 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RARAP10276 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RARAP10276 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.82■□□□□ 0.92
RARAP10276 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RARAP10276 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.82■□□□□ 0.92
RARAP10276 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms