Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP2P08253 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP2P08253 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP2P08253 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.07■□□□□ 0.8
MMP2P08253 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 RPS2P52-201ENST00000469610 820 ntBASIC20.07■□□□□ 0.8
MMP2P08253 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
MMP2P08253 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MMP2P08253 AC120498.8-201ENST00000614275 531 ntBASIC20.07■□□□□ 0.8
MMP2P08253 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.07■□□□□ 0.8
MMP2P08253 AC009237.14-201ENST00000609975 1594 ntBASIC20.07■□□□□ 0.8
MMP2P08253 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
MMP2P08253 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP2P08253 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP2P08253 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP2P08253 AC008687.6-201ENST00000596318 630 ntBASIC20.06■□□□□ 0.8
MMP2P08253 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP2P08253 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.06■□□□□ 0.8
MMP2P08253 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
MMP2P08253 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP2P08253 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP2P08253 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP2P08253 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP2P08253 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MMP2P08253 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP2P08253 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP2P08253 AC116351.2-201ENST00000606540 1585 ntBASIC20.05■□□□□ 0.8
MMP2P08253 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP2P08253 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
MMP2P08253 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP2P08253 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.05■□□□□ 0.8
MMP2P08253 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP2P08253 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP2P08253 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP2P08253 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP2P08253 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP2P08253 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP2P08253 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP2P08253 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP2P08253 AC018553.1-201ENST00000616682 1458 ntBASIC20.05■□□□□ 0.8
MMP2P08253 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP2P08253 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MMP2P08253 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP2P08253 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP2P08253 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MMP2P08253 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
MMP2P08253 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.04■□□□□ 0.8
MMP2P08253 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.04■□□□□ 0.8
MMP2P08253 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP2P08253 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP2P08253 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP2P08253 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP2P08253 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 PKD1P6-201ENST00000343738 4769 ntBASIC20.04■□□□□ 0.8
MMP2P08253 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP2P08253 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP2P08253 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
MMP2P08253 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.03■□□□□ 0.8
MMP2P08253 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.03■□□□□ 0.8
MMP2P08253 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP2P08253 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP2P08253 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.03■□□□□ 0.8
MMP2P08253 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MMP2P08253 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP2P08253 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MMP2P08253 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP2P08253 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms