Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC01521-201ENST00000504184 1943 ntBASIC20.1■□□□□ 0.81
RETP07949 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.09■□□□□ 0.81
RETP07949 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.09■□□□□ 0.81
RETP07949 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RETP07949 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.09■□□□□ 0.81
RETP07949 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.09■□□□□ 0.81
RETP07949 AC026471.6-201ENST00000622954 1905 ntBASIC20.09■□□□□ 0.81
RETP07949 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETP07949 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.09■□□□□ 0.81
RETP07949 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.08■□□□□ 0.81
RETP07949 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.08■□□□□ 0.81
RETP07949 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.08■□□□□ 0.81
RETP07949 SLC25A3P1-201ENST00000443844 931 ntBASIC20.08■□□□□ 0.81
RETP07949 AC104076.2-201ENST00000448912 469 ntBASIC20.08■□□□□ 0.81
RETP07949 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.08■□□□□ 0.81
RETP07949 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RETP07949 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETP07949 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RETP07949 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RETP07949 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RETP07949 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.08■□□□□ 0.8
RETP07949 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.08■□□□□ 0.8
RETP07949 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.08■□□□□ 0.8
RETP07949 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RETP07949 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.07■□□□□ 0.8
RETP07949 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.07■□□□□ 0.8
RETP07949 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.07■□□□□ 0.8
RETP07949 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.07■□□□□ 0.8
RETP07949 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RETP07949 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.07■□□□□ 0.8
RETP07949 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RETP07949 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.07■□□□□ 0.8
RETP07949 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.07■□□□□ 0.8
RETP07949 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RETP07949 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETP07949 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RETP07949 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETP07949 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.06■□□□□ 0.8
RETP07949 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.06■□□□□ 0.8
RETP07949 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETP07949 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETP07949 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.06■□□□□ 0.8
RETP07949 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.06■□□□□ 0.8
RETP07949 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.06■□□□□ 0.8
RETP07949 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.06■□□□□ 0.8
RETP07949 FITM1-202ENST00000559294 800 ntBASIC20.06■□□□□ 0.8
RETP07949 AC010947.1-201ENST00000623454 693 ntBASIC20.06■□□□□ 0.8
RETP07949 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RETP07949 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.06■□□□□ 0.8
RETP07949 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
RETP07949 CYP2D8P-201ENST00000433633 1490 ntBASIC20.05■□□□□ 0.8
RETP07949 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 AP002982.1-201ENST00000492365 877 ntBASIC20.05■□□□□ 0.8
RETP07949 AL356652.1-201ENST00000615962 565 ntBASIC20.05■□□□□ 0.8
RETP07949 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 AL157384.1-201ENST00000445995 2473 ntBASIC20.05■□□□□ 0.8
RETP07949 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.05■□□□□ 0.8
RETP07949 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RETP07949 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
RETP07949 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms