Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCCBP05166 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCCBP05166 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.72■□□□□ 0.75
PCCBP05166 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCCBP05166 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCCBP05166 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.72■□□□□ 0.75
PCCBP05166 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.72■□□□□ 0.75
PCCBP05166 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PCCBP05166 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PCCBP05166 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.72■□□□□ 0.75
PCCBP05166 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCCBP05166 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 CLDN5-201ENST00000403084 2357 ntBASIC19.71■□□□□ 0.75
PCCBP05166 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.71■□□□□ 0.75
PCCBP05166 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.71■□□□□ 0.75
PCCBP05166 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.71■□□□□ 0.75
PCCBP05166 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.71■□□□□ 0.75
PCCBP05166 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.71■□□□□ 0.75
PCCBP05166 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCCBP05166 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.71■□□□□ 0.75
PCCBP05166 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCCBP05166 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCCBP05166 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.7■□□□□ 0.74
PCCBP05166 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCCBP05166 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PCCBP05166 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCCBP05166 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PCCBP05166 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.7■□□□□ 0.74
PCCBP05166 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.7■□□□□ 0.74
PCCBP05166 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCCBP05166 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.7■□□□□ 0.74
PCCBP05166 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.7■□□□□ 0.74
PCCBP05166 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCCBP05166 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCCBP05166 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.7■□□□□ 0.74
PCCBP05166 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
PCCBP05166 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCCBP05166 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.69■□□□□ 0.74
PCCBP05166 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.69■□□□□ 0.74
PCCBP05166 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCCBP05166 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
PCCBP05166 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PCCBP05166 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCCBP05166 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCCBP05166 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCCBP05166 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCCBP05166 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCCBP05166 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.68■□□□□ 0.74
PCCBP05166 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCCBP05166 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.68■□□□□ 0.74
PCCBP05166 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCCBP05166 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCCBP05166 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms