Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.19■□□□□ 0.5
P04436 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.19■□□□□ 0.5
P04436 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.19■□□□□ 0.5
P04436 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.19■□□□□ 0.5
P04436 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.19■□□□□ 0.5
P04436 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P04436 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.18■□□□□ 0.5
P04436 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.18■□□□□ 0.5
P04436 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.18■□□□□ 0.5
P04436 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.18■□□□□ 0.5
P04436 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.18■□□□□ 0.5
P04436 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.18■□□□□ 0.5
P04436 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
P04436 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
P04436 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.18■□□□□ 0.5
P04436 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04436 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 AC020907.5-201ENST00000624372 1936 ntBASIC18.17■□□□□ 0.5
P04436 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.17■□□□□ 0.5
P04436 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.17■□□□□ 0.5
P04436 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
P04436 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
P04436 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.17■□□□□ 0.5
P04436 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.17■□□□□ 0.5
P04436 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.17■□□□□ 0.5
P04436 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.17■□□□□ 0.5
P04436 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 NBPF21P-201ENST00000425093 1451 ntBASIC18.17■□□□□ 0.5
P04436 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.17■□□□□ 0.5
P04436 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.17■□□□□ 0.5
P04436 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04436 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.16■□□□□ 0.5
P04436 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.16■□□□□ 0.5
P04436 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
P04436 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.16■□□□□ 0.5
P04436 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.16■□□□□ 0.5
P04436 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.16■□□□□ 0.5
P04436 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.16■□□□□ 0.5
P04436 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.16■□□□□ 0.5
P04436 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
P04436 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
P04436 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.16■□□□□ 0.5
P04436 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04436 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.16■□□□□ 0.5
P04436 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.16■□□□□ 0.5
P04436 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.15■□□□□ 0.5
P04436 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
P04436 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
P04436 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
P04436 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.15■□□□□ 0.5
P04436 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.15■□□□□ 0.5
P04436 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
P04436 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.15■□□□□ 0.5
P04436 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.15■□□□□ 0.5
P04436 AC004264.1-201ENST00000608354 794 ntBASIC18.15■□□□□ 0.5
P04436 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
P04436 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04436 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
P04436 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P04436 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms