Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-ND3P03897 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 SLC7A5P2-201ENST00000553010 536 ntBASIC20.2■□□□□ 0.82
MT-ND3P03897 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-ND3P03897 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.2■□□□□ 0.82
MT-ND3P03897 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MT-ND3P03897 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
MT-ND3P03897 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-ND3P03897 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-ND3P03897 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MT-ND3P03897 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-ND3P03897 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-ND3P03897 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.19■□□□□ 0.82
MT-ND3P03897 AC005181.1-201ENST00000604782 1256 ntBASIC20.19■□□□□ 0.82
MT-ND3P03897 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.19■□□□□ 0.82
MT-ND3P03897 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-ND3P03897 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MT-ND3P03897 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-ND3P03897 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MT-ND3P03897 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.19■□□□□ 0.82
MT-ND3P03897 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
MT-ND3P03897 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
MT-ND3P03897 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 BX119927.1-201ENST00000636596 1552 ntBASIC20.18■□□□□ 0.82
MT-ND3P03897 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 SLC7A5P1-201ENST00000568957 537 ntBASIC20.18■□□□□ 0.82
MT-ND3P03897 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
MT-ND3P03897 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MT-ND3P03897 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
MT-ND3P03897 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.17■□□□□ 0.82
MT-ND3P03897 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-ND3P03897 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.17■□□□□ 0.82
MT-ND3P03897 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-ND3P03897 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-ND3P03897 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.17■□□□□ 0.82
MT-ND3P03897 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MT-ND3P03897 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MT-ND3P03897 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MT-ND3P03897 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 AP000974.1-201ENST00000623909 2387 ntBASIC20.16■□□□□ 0.82
MT-ND3P03897 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MT-ND3P03897 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MT-ND3P03897 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
MT-ND3P03897 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.16■□□□□ 0.82
MT-ND3P03897 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
MT-ND3P03897 AC083906.2-201ENST00000511578 360 ntBASIC20.16■□□□□ 0.82
MT-ND3P03897 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.16■□□□□ 0.82
MT-ND3P03897 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms