Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DRAP01903 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DRAP01903 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.42■■□□□ 1.02
HLA-DRAP01903 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HLA-DRAP01903 AC124283.5-201ENST00000624661 1809 ntBASIC21.42■■□□□ 1.02
HLA-DRAP01903 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.42■■□□□ 1.02
HLA-DRAP01903 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 RPS2P52-201ENST00000469610 820 ntBASIC21.41■■□□□ 1.02
HLA-DRAP01903 UNC93B4-201ENST00000505679 747 ntBASIC21.41■■□□□ 1.02
HLA-DRAP01903 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.41■■□□□ 1.02
HLA-DRAP01903 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HLA-DRAP01903 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 AC120498.8-201ENST00000614275 531 ntBASIC21.4■■□□□ 1.02
HLA-DRAP01903 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.4■■□□□ 1.02
HLA-DRAP01903 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.4■■□□□ 1.02
HLA-DRAP01903 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HLA-DRAP01903 PHGDH-210ENST00000641115 1638 ntBASIC21.4■■□□□ 1.02
HLA-DRAP01903 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.4■■□□□ 1.02
HLA-DRAP01903 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DRAP01903 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.39■■□□□ 1.02
HLA-DRAP01903 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.39■■□□□ 1.02
HLA-DRAP01903 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HLA-DRAP01903 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
HLA-DRAP01903 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
HLA-DRAP01903 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HLA-DRAP01903 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.39■■□□□ 1.01
HLA-DRAP01903 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 AC008687.6-201ENST00000596318 630 ntBASIC21.39■■□□□ 1.01
HLA-DRAP01903 AC008403.3-201ENST00000598924 454 ntBASIC21.39■■□□□ 1.01
HLA-DRAP01903 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DRAP01903 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
HLA-DRAP01903 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HLA-DRAP01903 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms