Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.79■■□□□ 1.4
MBD4O95243 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.79■■□□□ 1.4
MBD4O95243 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.78■■□□□ 1.4
MBD4O95243 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.78■■□□□ 1.4
MBD4O95243 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.78■■□□□ 1.4
MBD4O95243 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.78■■□□□ 1.4
MBD4O95243 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.78■■□□□ 1.4
MBD4O95243 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.78■■□□□ 1.4
MBD4O95243 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
MBD4O95243 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
MBD4O95243 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MBD4O95243 AC116351.2-201ENST00000606540 1585 ntBASIC23.78■■□□□ 1.4
MBD4O95243 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MBD4O95243 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.78■■□□□ 1.4
MBD4O95243 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.77■■□□□ 1.4
MBD4O95243 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
MBD4O95243 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
MBD4O95243 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.77■■□□□ 1.4
MBD4O95243 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
MBD4O95243 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
MBD4O95243 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.77■■□□□ 1.4
MBD4O95243 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.77■■□□□ 1.4
MBD4O95243 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
MBD4O95243 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.77■■□□□ 1.4
MBD4O95243 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
MBD4O95243 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MBD4O95243 PHGDH-210ENST00000641115 1638 ntBASIC23.77■■□□□ 1.4
MBD4O95243 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD4O95243 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD4O95243 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.76■■□□□ 1.39
MBD4O95243 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MBD4O95243 AC018553.1-201ENST00000616682 1458 ntBASIC23.76■■□□□ 1.39
MBD4O95243 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
MBD4O95243 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.76■■□□□ 1.39
MBD4O95243 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD4O95243 AC008550.1-201ENST00000511500 884 ntBASIC23.76■■□□□ 1.39
MBD4O95243 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.76■■□□□ 1.39
MBD4O95243 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.76■■□□□ 1.39
MBD4O95243 AP006294.2-201ENST00000641667 209 ntBASIC23.76■■□□□ 1.39
MBD4O95243 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
MBD4O95243 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.75■■□□□ 1.39
MBD4O95243 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.75■■□□□ 1.39
MBD4O95243 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 NBPF21P-201ENST00000425093 1451 ntBASIC23.75■■□□□ 1.39
MBD4O95243 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
MBD4O95243 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.75■■□□□ 1.39
MBD4O95243 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
MBD4O95243 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.75■■□□□ 1.39
MBD4O95243 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.75■■□□□ 1.39
MBD4O95243 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.75■■□□□ 1.39
MBD4O95243 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.75■■□□□ 1.39
MBD4O95243 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
MBD4O95243 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MBD4O95243 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
MBD4O95243 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.74■■□□□ 1.39
MBD4O95243 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MBD4O95243 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MBD4O95243 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MBD4O95243 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.74■■□□□ 1.39
MBD4O95243 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.74■■□□□ 1.39
MBD4O95243 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.74■■□□□ 1.39
MBD4O95243 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms