Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.62■■□□□ 1.69
PTCD1O75127 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.62■■□□□ 1.69
PTCD1O75127 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD1O75127 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PTCD1O75127 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
PTCD1O75127 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD1O75127 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD1O75127 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.62■■□□□ 1.69
PTCD1O75127 KRT18P22-201ENST00000402024 1347 ntBASIC25.62■■□□□ 1.69
PTCD1O75127 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
PTCD1O75127 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
PTCD1O75127 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 TERF1P1-201ENST00000311003 1181 ntBASIC25.61■■□□□ 1.69
PTCD1O75127 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.61■■□□□ 1.69
PTCD1O75127 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC25.61■■□□□ 1.69
PTCD1O75127 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.61■■□□□ 1.69
PTCD1O75127 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 AP006587.1-201ENST00000534129 1502 ntBASIC25.61■■□□□ 1.69
PTCD1O75127 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 DPP3P2-201ENST00000416030 1696 ntBASIC25.61■■□□□ 1.69
PTCD1O75127 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.61■■□□□ 1.69
PTCD1O75127 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD1O75127 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.6■■□□□ 1.69
PTCD1O75127 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.6■■□□□ 1.69
PTCD1O75127 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.6■■□□□ 1.69
PTCD1O75127 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.6■■□□□ 1.69
PTCD1O75127 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.6■■□□□ 1.69
PTCD1O75127 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PTCD1O75127 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCD1O75127 AL137013.1-201ENST00000432946 1228 ntBASIC25.59■■□□□ 1.69
PTCD1O75127 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD1O75127 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.59■■□□□ 1.69
PTCD1O75127 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.59■■□□□ 1.69
PTCD1O75127 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.59■■□□□ 1.69
PTCD1O75127 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCD1O75127 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCD1O75127 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.59■■□□□ 1.69
PTCD1O75127 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PTCD1O75127 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD1O75127 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.59■■□□□ 1.69
PTCD1O75127 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.59■■□□□ 1.69
PTCD1O75127 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD1O75127 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD1O75127 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.59■■□□□ 1.69
PTCD1O75127 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD1O75127 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD1O75127 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD1O75127 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PTCD1O75127 AC073508.3-201ENST00000619697 1419 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD1O75127 MESTP1-201ENST00000404287 994 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD1O75127 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD1O75127 SLC25A3P1-201ENST00000443844 931 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD1O75127 C1QL1P1-201ENST00000568105 661 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.58■■□□□ 1.69
PTCD1O75127 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
PTCD1O75127 AL031985.4-201ENST00000642138 673 ntBASIC25.58■■□□□ 1.69
PTCD1O75127 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PTCD1O75127 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD1O75127 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD1O75127 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PTCD1O75127 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.57■■□□□ 1.68
PTCD1O75127 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
PTCD1O75127 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PTCD1O75127 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD1O75127 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD1O75127 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.56■■□□□ 1.68
PTCD1O75127 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD1O75127 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms