Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
IDH3BO43837 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
IDH3BO43837 AC097381.1-201ENST00000429019 1296 ntBASIC18.2■□□□□ 0.5
IDH3BO43837 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IDH3BO43837 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.2■□□□□ 0.5
IDH3BO43837 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
IDH3BO43837 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
IDH3BO43837 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.2■□□□□ 0.5
IDH3BO43837 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 AC112907.3-201ENST00000577781 2400 ntBASIC18.19■□□□□ 0.5
IDH3BO43837 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.19■□□□□ 0.5
IDH3BO43837 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.19■□□□□ 0.5
IDH3BO43837 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.19■□□□□ 0.5
IDH3BO43837 PGM5P4-201ENST00000421970 445 ntBASIC18.19■□□□□ 0.5
IDH3BO43837 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.19■□□□□ 0.5
IDH3BO43837 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.19■□□□□ 0.5
IDH3BO43837 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
IDH3BO43837 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
IDH3BO43837 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
IDH3BO43837 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IDH3BO43837 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.18■□□□□ 0.5
IDH3BO43837 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.18■□□□□ 0.5
IDH3BO43837 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.18■□□□□ 0.5
IDH3BO43837 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.18■□□□□ 0.5
IDH3BO43837 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
IDH3BO43837 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
IDH3BO43837 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.18■□□□□ 0.5
IDH3BO43837 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.18■□□□□ 0.5
IDH3BO43837 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IDH3BO43837 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
IDH3BO43837 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IDH3BO43837 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
IDH3BO43837 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 AP000974.1-201ENST00000623909 2387 ntBASIC18.17■□□□□ 0.5
IDH3BO43837 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.17■□□□□ 0.5
IDH3BO43837 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
IDH3BO43837 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
IDH3BO43837 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
IDH3BO43837 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 LTB4R2-202ENST00000528054 3092 ntBASIC18.17■□□□□ 0.5
IDH3BO43837 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.17■□□□□ 0.5
IDH3BO43837 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IDH3BO43837 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms