Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNAB3O43448 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
KCNAB3O43448 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.83■□□□□ 0.28
KCNAB3O43448 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.83■□□□□ 0.28
KCNAB3O43448 AC004854.2-201ENST00000608450 1441 ntBASIC16.83■□□□□ 0.28
KCNAB3O43448 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
KCNAB3O43448 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNAB3O43448 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.83■□□□□ 0.28
KCNAB3O43448 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNAB3O43448 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNAB3O43448 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNAB3O43448 KRT19P1-201ENST00000405746 1186 ntBASIC16.82■□□□□ 0.28
KCNAB3O43448 FAM210CP-201ENST00000445714 574 ntBASIC16.82■□□□□ 0.28
KCNAB3O43448 RPS2P4-201ENST00000476944 856 ntBASIC16.82■□□□□ 0.28
KCNAB3O43448 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNAB3O43448 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNAB3O43448 SLC7A5P2-201ENST00000553010 536 ntBASIC16.82■□□□□ 0.28
KCNAB3O43448 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNAB3O43448 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNAB3O43448 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNAB3O43448 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNAB3O43448 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNAB3O43448 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNAB3O43448 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNAB3O43448 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KCNAB3O43448 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNAB3O43448 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNAB3O43448 AC120498.9-201ENST00000339021 3867 ntBASIC16.81■□□□□ 0.28
KCNAB3O43448 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNAB3O43448 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNAB3O43448 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
KCNAB3O43448 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNAB3O43448 DUSP5P2-201ENST00000426873 1033 ntBASIC16.81■□□□□ 0.28
KCNAB3O43448 ECEL1P3-201ENST00000427961 737 ntBASIC16.81■□□□□ 0.28
KCNAB3O43448 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNAB3O43448 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNAB3O43448 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNAB3O43448 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
KCNAB3O43448 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.81■□□□□ 0.28
KCNAB3O43448 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KCNAB3O43448 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNAB3O43448 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.8■□□□□ 0.28
KCNAB3O43448 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.8■□□□□ 0.28
KCNAB3O43448 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNAB3O43448 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.8■□□□□ 0.28
KCNAB3O43448 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.8■□□□□ 0.28
KCNAB3O43448 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.8■□□□□ 0.28
KCNAB3O43448 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
KCNAB3O43448 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KCNAB3O43448 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms