Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MSI1O43347 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.68■□□□□ 0.9
MSI1O43347 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.68■□□□□ 0.9
MSI1O43347 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.68■□□□□ 0.9
MSI1O43347 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.68■□□□□ 0.9
MSI1O43347 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
MSI1O43347 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.68■□□□□ 0.9
MSI1O43347 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.68■□□□□ 0.9
MSI1O43347 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MSI1O43347 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.67■□□□□ 0.9
MSI1O43347 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MSI1O43347 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MSI1O43347 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.67■□□□□ 0.9
MSI1O43347 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.67■□□□□ 0.9
MSI1O43347 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.67■□□□□ 0.9
MSI1O43347 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.67■□□□□ 0.9
MSI1O43347 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.67■□□□□ 0.9
MSI1O43347 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MSI1O43347 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 AC239809.2-201ENST00000415381 517 ntBASIC20.66■□□□□ 0.9
MSI1O43347 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.66■□□□□ 0.9
MSI1O43347 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.66■□□□□ 0.9
MSI1O43347 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
MSI1O43347 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.66■□□□□ 0.9
MSI1O43347 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.66■□□□□ 0.9
MSI1O43347 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.66■□□□□ 0.9
MSI1O43347 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.66■□□□□ 0.9
MSI1O43347 AL121906.2-201ENST00000621597 723 ntBASIC20.66■□□□□ 0.9
MSI1O43347 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 AC099778.1-201ENST00000568593 1911 ntBASIC20.66■□□□□ 0.9
MSI1O43347 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
MSI1O43347 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MSI1O43347 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
MSI1O43347 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.65■□□□□ 0.9
MSI1O43347 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
MSI1O43347 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.65■□□□□ 0.9
MSI1O43347 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 KRASP1-201ENST00000407852 552 ntBASIC20.65■□□□□ 0.9
MSI1O43347 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MSI1O43347 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.65■□□□□ 0.9
MSI1O43347 AC124016.1-201ENST00000609552 612 ntBASIC20.65■□□□□ 0.9
MSI1O43347 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.65■□□□□ 0.9
MSI1O43347 AL121829.2-201ENST00000620908 328 ntBASIC20.65■□□□□ 0.9
MSI1O43347 FAM197Y4-202ENST00000622692 608 ntBASIC20.65■□□□□ 0.9
MSI1O43347 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.65■□□□□ 0.9
MSI1O43347 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.65■□□□□ 0.9
MSI1O43347 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MSI1O43347 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MSI1O43347 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
MSI1O43347 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MSI1O43347 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSI1O43347 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSI1O43347 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSI1O43347 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.64■□□□□ 0.9
MSI1O43347 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.64■□□□□ 0.9
MSI1O43347 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MSI1O43347 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
MSI1O43347 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MSI1O43347 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms