Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
ABCC4O15439 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 ECEL1P3-201ENST00000427961 737 ntBASIC25.4■■□□□ 1.66
ABCC4O15439 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCC4O15439 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCC4O15439 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.4■■□□□ 1.66
ABCC4O15439 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 AC112907.3-201ENST00000577781 2400 ntBASIC25.4■■□□□ 1.66
ABCC4O15439 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
ABCC4O15439 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCC4O15439 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCC4O15439 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
ABCC4O15439 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 KRT8P20-201ENST00000423953 1409 ntBASIC25.4■■□□□ 1.66
ABCC4O15439 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.4■■□□□ 1.66
ABCC4O15439 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.4■■□□□ 1.66
ABCC4O15439 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ABCC4O15439 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.39■■□□□ 1.66
ABCC4O15439 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.39■■□□□ 1.66
ABCC4O15439 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
ABCC4O15439 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.39■■□□□ 1.66
ABCC4O15439 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.39■■□□□ 1.66
ABCC4O15439 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.39■■□□□ 1.66
ABCC4O15439 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
ABCC4O15439 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.39■■□□□ 1.66
ABCC4O15439 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 AC124016.1-201ENST00000609552 612 ntBASIC25.39■■□□□ 1.66
ABCC4O15439 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ABCC4O15439 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC25.39■■□□□ 1.65
ABCC4O15439 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.39■■□□□ 1.65
ABCC4O15439 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.39■■□□□ 1.65
ABCC4O15439 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.39■■□□□ 1.65
ABCC4O15439 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
ABCC4O15439 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.38■■□□□ 1.65
ABCC4O15439 AC012618.2-201ENST00000428058 849 ntBASIC25.38■■□□□ 1.65
ABCC4O15439 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
ABCC4O15439 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.38■■□□□ 1.65
ABCC4O15439 AC233702.5-201ENST00000584107 538 ntBASIC25.38■■□□□ 1.65
ABCC4O15439 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.38■■□□□ 1.65
ABCC4O15439 AL023875.1-201ENST00000640777 796 ntBASIC25.38■■□□□ 1.65
ABCC4O15439 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
ABCC4O15439 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ABCC4O15439 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCC4O15439 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCC4O15439 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
ABCC4O15439 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.38■■□□□ 1.65
ABCC4O15439 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCC4O15439 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.38■■□□□ 1.65
ABCC4O15439 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 AC005829.2-201ENST00000571422 1056 ntBASIC25.37■■□□□ 1.65
ABCC4O15439 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.37■■□□□ 1.65
ABCC4O15439 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 AC006557.6-201ENST00000623071 864 ntBASIC25.37■■□□□ 1.65
ABCC4O15439 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.37■■□□□ 1.65
ABCC4O15439 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
ABCC4O15439 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 AL691432.2-201ENST00000607222 2038 ntBASIC25.37■■□□□ 1.65
ABCC4O15439 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
ABCC4O15439 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 AC133681.1-201ENST00000465482 601 ntBASIC25.37■■□□□ 1.65
ABCC4O15439 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ABCC4O15439 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.37■■□□□ 1.65
ABCC4O15439 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCC4O15439 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ABCC4O15439 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCC4O15439 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.36■■□□□ 1.65
ABCC4O15439 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ABCC4O15439 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.36■■□□□ 1.65
ABCC4O15439 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ABCC4O15439 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.36■■□□□ 1.65
ABCC4O15439 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms