Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TNRC18O15417 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.88■■□□□ 1.09
TNRC18O15417 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TNRC18O15417 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.87■■□□□ 1.09
TNRC18O15417 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.87■■□□□ 1.09
TNRC18O15417 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TNRC18O15417 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 SPDYE15P-201ENST00000424157 909 ntBASIC21.87■■□□□ 1.09
TNRC18O15417 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 AC140113.2-201ENST00000604370 208 ntBASIC21.87■■□□□ 1.09
TNRC18O15417 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.87■■□□□ 1.09
TNRC18O15417 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
TNRC18O15417 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 STARP1-201ENST00000397973 869 ntBASIC21.87■■□□□ 1.09
TNRC18O15417 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TNRC18O15417 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.87■■□□□ 1.09
TNRC18O15417 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
TNRC18O15417 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 AC004980.1-204ENST00000429707 299 ntBASIC21.86■■□□□ 1.09
TNRC18O15417 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
TNRC18O15417 AP000692.2-201ENST00000608391 879 ntBASIC21.86■■□□□ 1.09
TNRC18O15417 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 AC016734.2-201ENST00000624325 1377 ntBASIC21.86■■□□□ 1.09
TNRC18O15417 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.86■■□□□ 1.09
TNRC18O15417 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
TNRC18O15417 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.86■■□□□ 1.09
TNRC18O15417 KRT16P4-201ENST00000453883 522 ntBASIC21.86■■□□□ 1.09
TNRC18O15417 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.86■■□□□ 1.09
TNRC18O15417 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TNRC18O15417 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.86■■□□□ 1.09
TNRC18O15417 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.86■■□□□ 1.09
TNRC18O15417 BX119927.1-201ENST00000636596 1552 ntBASIC21.86■■□□□ 1.09
TNRC18O15417 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.86■■□□□ 1.09
TNRC18O15417 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TNRC18O15417 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.85■■□□□ 1.09
TNRC18O15417 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.85■■□□□ 1.09
TNRC18O15417 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.85■■□□□ 1.09
TNRC18O15417 KRT18P31-201ENST00000506277 1292 ntBASIC21.85■■□□□ 1.09
TNRC18O15417 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 AL691403.2-201ENST00000618460 490 ntBASIC21.85■■□□□ 1.09
TNRC18O15417 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.85■■□□□ 1.09
TNRC18O15417 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TNRC18O15417 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.85■■□□□ 1.09
TNRC18O15417 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.85■■□□□ 1.09
TNRC18O15417 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNRC18O15417 HTR5BP-201ENST00000430851 1154 ntBASIC21.84■■□□□ 1.09
TNRC18O15417 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.84■■□□□ 1.09
TNRC18O15417 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNRC18O15417 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TNRC18O15417 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TNRC18O15417 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.84■■□□□ 1.09
TNRC18O15417 AC244107.1-201ENST00000442033 332 ntBASIC21.84■■□□□ 1.09
TNRC18O15417 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNRC18O15417 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.84■■□□□ 1.09
TNRC18O15417 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TNRC18O15417 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TNRC18O15417 AL645929.1-201ENST00000420084 975 ntBASIC21.84■■□□□ 1.09
TNRC18O15417 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.84■■□□□ 1.09
TNRC18O15417 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
TNRC18O15417 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.83■■□□□ 1.09
TNRC18O15417 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TNRC18O15417 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.83■■□□□ 1.09
TNRC18O15417 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TNRC18O15417 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNRC18O15417 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
TNRC18O15417 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
TNRC18O15417 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms