Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH17O14917 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH17O14917 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH17O14917 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH17O14917 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH17O14917 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDH17O14917 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDH17O14917 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 AL390719.1-204ENST00000412397 1219 ntBASIC18.97■□□□□ 0.63
PCDH17O14917 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDH17O14917 AC099778.1-201ENST00000568593 1911 ntBASIC18.97■□□□□ 0.63
PCDH17O14917 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH17O14917 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDH17O14917 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH17O14917 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDH17O14917 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDH17O14917 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDH17O14917 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDH17O14917 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH17O14917 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDH17O14917 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH17O14917 AC128676.1-201ENST00000454392 318 ntBASIC18.96■□□□□ 0.63
PCDH17O14917 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 AC005829.2-201ENST00000571422 1056 ntBASIC18.96■□□□□ 0.63
PCDH17O14917 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDH17O14917 KRT8P36-201ENST00000489121 1440 ntBASIC18.96■□□□□ 0.63
PCDH17O14917 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH17O14917 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH17O14917 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH17O14917 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDH17O14917 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH17O14917 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.95■□□□□ 0.62
PCDH17O14917 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDH17O14917 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH17O14917 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH17O14917 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH17O14917 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
PCDH17O14917 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDH17O14917 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PCDH17O14917 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
PCDH17O14917 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDH17O14917 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH17O14917 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDH17O14917 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH17O14917 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH17O14917 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PCDH17O14917 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDH17O14917 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDH17O14917 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms