Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 DUX4L26-201ENST00000489078 1255 ntBASIC19.43■□□□□ 0.7
TAF4O00268 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.43■□□□□ 0.7
TAF4O00268 AC087388.1-201ENST00000571370 1112 ntBASIC19.43■□□□□ 0.7
TAF4O00268 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
TAF4O00268 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.43■□□□□ 0.7
TAF4O00268 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TAF4O00268 AC244015.2-201ENST00000616358 1861 ntBASIC19.43■□□□□ 0.7
TAF4O00268 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TAF4O00268 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TAF4O00268 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TAF4O00268 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 TERF1P1-201ENST00000311003 1181 ntBASIC19.42■□□□□ 0.7
TAF4O00268 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.42■□□□□ 0.7
TAF4O00268 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.42■□□□□ 0.7
TAF4O00268 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.42■□□□□ 0.7
TAF4O00268 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TAF4O00268 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TAF4O00268 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.42■□□□□ 0.7
TAF4O00268 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
TAF4O00268 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TAF4O00268 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
TAF4O00268 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TAF4O00268 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.41■□□□□ 0.7
TAF4O00268 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.41■□□□□ 0.7
TAF4O00268 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.41■□□□□ 0.7
TAF4O00268 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TAF4O00268 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.41■□□□□ 0.7
TAF4O00268 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 AC087633.2-202ENST00000565166 1439 ntBASIC19.41■□□□□ 0.7
TAF4O00268 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TAF4O00268 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.4■□□□□ 0.7
TAF4O00268 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.4■□□□□ 0.7
TAF4O00268 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.4■□□□□ 0.7
TAF4O00268 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.4■□□□□ 0.7
TAF4O00268 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
TAF4O00268 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.4■□□□□ 0.7
TAF4O00268 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.4■□□□□ 0.7
TAF4O00268 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.4■□□□□ 0.7
TAF4O00268 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.4■□□□□ 0.7
TAF4O00268 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.4■□□□□ 0.7
TAF4O00268 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TAF4O00268 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.4■□□□□ 0.7
TAF4O00268 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TAF4O00268 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TAF4O00268 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TAF4O00268 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TAF4O00268 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TAF4O00268 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TAF4O00268 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
TAF4O00268 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.39■□□□□ 0.69
TAF4O00268 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.39■□□□□ 0.69
TAF4O00268 AL137013.1-201ENST00000432946 1228 ntBASIC19.39■□□□□ 0.69
TAF4O00268 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.39■□□□□ 0.69
TAF4O00268 KRT126P-201ENST00000549467 1181 ntBASIC19.39■□□□□ 0.69
TAF4O00268 AC006557.6-201ENST00000623071 864 ntBASIC19.39■□□□□ 0.69
TAF4O00268 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TAF4O00268 LINC01568-207ENST00000641790 1380 ntBASIC19.39■□□□□ 0.69
TAF4O00268 AC079598.2-202ENST00000546624 1451 ntBASIC19.39■□□□□ 0.69
TAF4O00268 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TAF4O00268 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 AC087742.1-201ENST00000575880 1738 ntBASIC19.39■□□□□ 0.69
TAF4O00268 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TAF4O00268 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TAF4O00268 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms