Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MIR7108-201ENST00000614319 87 ntBASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC055733.4-201ENST00000638462 1354 ntBASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 AC137630.3-201ENST00000607245 391 ntBASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 BX005040.4-201ENST00000637145 1518 ntBASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
TMEM256-PLSCR3K7ERE1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms