Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.66
TRABD2BA6NFA1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRABD2BA6NFA1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 UPK3BP1-201ENST00000428678 509 ntBASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 AC010203.1-204ENST00000548782 407 ntBASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRABD2BA6NFA1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 ATP5G1P1-201ENST00000448724 379 ntBASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRABD2BA6NFA1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 AC073130.3-201ENST00000624389 2278 ntBASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRABD2BA6NFA1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 KSR1P1-201ENST00000446298 240 ntBASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 AC006011.2-201ENST00000621313 1158 ntBASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 AL121906.2-201ENST00000621597 723 ntBASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
TRABD2BA6NFA1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 TPM4P1-201ENST00000436100 807 ntBASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 AC023632.3-201ENST00000521633 145 ntBASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 AC091076.1-201ENST00000610741 619 ntBASIC19.1■□□□□ 0.65
TRABD2BA6NFA1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms